Difference between revisions of "CIMI Practitioners' Guide"
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* [https://1drv.ms/x/s!AlkpZJej6nh_k9dgBSgLrTfaKYcG2A Work Breakdown XLSD] | * [https://1drv.ms/x/s!AlkpZJej6nh_k9dgBSgLrTfaKYcG2A Work Breakdown XLSD] | ||
* [https://1drv.ms/w/s!AlkpZJej6nh_k6ZUeG7W6TaWcbTZ4Q CIMI Practitioners’ Guide] | * [https://1drv.ms/w/s!AlkpZJej6nh_k6ZUeG7W6TaWcbTZ4Q CIMI Practitioners’ Guide] | ||
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Revision as of 11:09, 14 February 2017
<<<CIMI Practitioners' Guide is under construction>>> <<< 2017-02-13 DRAFT >>>
Contents
Introduction
The 2017 CIMI-Sponsored HL7 Integration of Information Models and Tools (IIM&T) Project
- Facilitators: Nona Hall and Steve Hufnagel
- WIKI Objective: Empower CIMI members, partners and stakeholders to verify and validate ongoing work presented in an understandable form.
- CIMI Co-chairs: Stan Huff, Linda Bird, Galen Mulrooney, Richard Esmond
- Practitioners' Guide URL: http://wiki.hl7.org/index.php?title=CIMI_Practitioners%27_Guide
- CIMI WIKI URL: http://wiki.hl7.org/index.php?title=Clinical_Information_Modeling_Initiative_Work_Group
- CIMI Web Site: http://opencimi.org/
- IIM&T POC: Stephen.Hufnagel.HL7@gmail.com
This Practitioners' Guide is intended to keep HL7 Clinical Information Models and Tools (IIM&T) Project’s co-sponsors, stakeholders and proponents informed and engaged regarding understanding and using the Common Logical Information Model CLIM (SOLOR, FHIM, CIMI, CQF, DCM). Formulated by SMEs and endorsed by a solid base of stakeholders, this guide supports communications which is one of the three tenets of this project. The other two, namely, the integration work itself, supplemented by governance capitalizes on near term efforts to progress the project’s accomplishments and challenges, and is showcased here. While injection of resources are certainly needed and more stakeholders who will push for this work, we are maling the most of here-and-now efforts and meetings to demonstrate the merits of the integration of information models, enabled by tooling in order to bolster implementation assets such as but not limited to FHIR. Contributions are in turn acknowledged. We know this area is complex, and is not well understood and offer this insight to assist. We believe there are too many efforts trying to build the ultimate skyscraper, starting however on the third floor, without a sufficient foundation. To better our current delivery systems and position us for the ultimate Learning Health System where the data demands and stakeholders are greater, this effort offers what is regarded as the missing link; the foundation to semantic interoperability. Your feedback and suggestions in this quest to communicate the evolution of this work are welcome.
Acknowledgement
Collaboration that Grows with a Strong SME Base
- the contents of this Guide came from
- CIMI Co-Chairs
- Linda Bird BIT, IHTSDO
- Galen Mulrooney, FHA and VA contractor
- Richard Esmond, PenRad LLC
- Stanley Huff, Intermountain Healthcare
- Members of the following SDOs
- IHTSDO, POC: Linda Bird BIT
- HL7 Work Groups (PC, CDS, CIC, EHR, SOA, Vocab)
- The Open Group Healthcare Forum, Jason Lee POC
- ISO/CEN, POCs: Gerard Freriks, William Goossen, Gary Dickinson
- Federal Agency staff and contractors
- Department of Defense
- Veterans Administration
- Interagency Program Office
- ONC OST
- Federal Health Architecture (FHA)
- MITRE
- Members of the following Healthcare Organizations** Intermountain Healthcare
- PenRad, Inc., Results4Care
- HSPC and other interested parties
- Faculty, Staff and Students
- The University of Utah
Governance
To encourage Clinical Logical Information Model (CLIM) consistency, traceability and reuse:
- CIMI collaborates with federated model and tool projects, which are funded and governed apart from HL7.
- These projects are voluntarily being aligned and made CIMI-compliant (e.g., CIMI-sponsored HL7 IIM&T project and various HSPC Projects).
- Externally-developed CIMI-compliant models can be donated to HL7 for
- configuration management, peer review and standardization.
- This Practitioners' Guide and Newsletters are being used to keep everyone informed and aligned.
Scope
CIMI considers its work in the "Universal Realm”; where, current work might be considered "US Realm".
- CIMI uses International Standards, when available.
- CIMI is using a SNOMED extension including LOINC and RxNorm (SOLOR).
- SNOMED and LOINC are used beyond the US, such as Canada and UK.
- RxNorm is the most international medication terminology available
- RxNorm includes chemical ingredients, which are international; where, US pharmaceutical units, packaging and manufacturers can be replaced by foreign equivalents
- Technically, CIMI's SOLOR semantic-bindings are completely defined; where,
- SOLOR follows the SNOMED observation model with explicit context expressions (e.g., body site)
- CIMI's SOLOR terminology bindings are exemplars; where, incomplete exemplars lead to inconsistent implementation artefacts, such as FHIR or CDA profiles and extensions.
Goal, Objectives, Considerations, Steps and Attributes of Success
- The Goal is to help people live the healthiest lives possible,
- by enabling a “Learning Health System” supporting areas such as, but not limited to, Precision Medicine, CDS, Genomic/Omic, EHR and Ancillary systems; where,
- The Problem is that today’s systems do not capture the same computable information in the same way. Consequently, we cannot easily share information or merge information from different sources to create a harmonized, operational picture of a patient across multiple care locations and contexts.
- FHIR US Core (formerly known as DAF), currently embraced by the implementation community, are insufficient leading to unnecessary and extensive implementation variability.
- The Approach capitalizes on the inroads made with the exchange of data, standards and standards adoption, and,
- brings back a focus on data in order to make additional and necessary advancements and
- requires data that is computable, usable, extensible, and interpretable across disparate systems - a state that currently does not exist.
- The IT Objective is to make computable healthcare-data efficiently-and-effectively available when it is needed, where it needed and how it is needed to
- integrate existing healthcare-related information models, with semantically-consistent data, including appropriate provenance data (who, what, when, where, why, how)
- support development (implementation and test) projects
- support Model Driven Development pilot-projects across healthcare related platforms,
- use seamless model-instantiated tooling to generate implementation profiles and extension (e.g., FHIR, CDA, etc.)
- promote the development and use of free and open models, that are foundational to computable-interoperability
- maintain a clean separation of clinical model semantics using a SNOMED extension including LOINC and RxNorm (SOLOR)
- build upon and improve existing work; in particular US Core and FHIR core
- establish the Integration of SOLOR+FHIM+CIMI+CQF+US Core as the enabling foundation for
- Detailed Clinical Models (DCMs) for semantic-interoperability and
- Knowledge Artifacts (KNARTs) for analytics and reasoning
- align models and tooling to seamlessly extend the usability of these assets
- use model-instantiated tools to generate consistent-and-traceable standards-and-implementation artifacts
- advance in constructive steps through pilots and agile development-cycles of build, test, learn, plan and deploy cycles
- support pilot projects with appropriate Communications and Governance strategies
- Approach Considerations
- No action: to not act sustains the here-and-now, my-plate-is-full condition as well as stove-piped, discordant efforts = unacceptable
- Stovepipe efforts: no one asset can offer needed semantic interoperability solution: Integration (of models/tooling) a must!
- Efforts must be comprehensive & SME Driven
- What matters to modeling community can be seamless to what impact we produce, e.g., improved FHIR Profiles
- Persist via series of Pilots to apply lessons learned to
- Refine Integration / Project Steps
- Communication and Governance Strategies
- Promote Min/Max Approach to support timely & feasible model releases for implementation
- Engagement Strategy has to resonate with FHIR achievements / needs
- Produce fully formed, domain-driven set of new or reused resources that are then used in profile(s) as necessary.
- Leverage gains already achieved via initiatives, e.g., DAF, CQF, SDC, etc
- Recommended Steps to demonstrate the Viability of Integration Via Pilots
- Identify the Project with willing parties that will implement the outputs including enhanced FHIR Profile for the Project
- Create domain analysis model (DAM)
- Identify the data elements needed to support the project and / or the clinical content gaps in FHIR
- Identify the FHIM classes and FHIR Profiles that support the data elements; address gaps, as needed
- Make the detailed CIMI models utilizing SOLOR for the source of terminology / vocabulary
- Place model in a registry that is publicly available
- Approve the model
- Construct application (s)
- Test the FHIR Profile / application for compliance with the model and standards
- Put the application in production use & evaluate its value
- Parallel Activities: access to SOLOR Terminology Server; model harmonization / maintenance; access to people & EHRs
- Identify the Project with willing parties that will implement the outputs including enhanced FHIR Profile for the Project
- Attributes of Success
- Increased awareness related to Information/Tooling/Mapping & Integration efforts accenting on Distinction and Utility
- Advocacy to insert and jump start routinely with (formal) information Modeling Assets into projects and standards development efforts
- Advocacy to support follow-on efforts / Implementation Practicality
- Sustain Core SME Framework / Expand / Invest in building upon current SME base
- Apply insights / recommendations from all efforts to date, e.g., Info Modeling Tech Forum
- Build out near term, mid term & long term efforts via work breakdown supporting Pilots
- Assess / layout resourcing implications tied to report
- Capitalize on follow up Modeling Meeting with FHIR colleagues and establish Process Engagement Strategy
- Annual HL7 standards, culminating with an ISO standard in 2020.
- CLIM & SIGG-tools use by EHR related developers, implementers and vendors
- Sustain predictable stakeholder contact
- Expand Communications / Outreach; Governance; Strategic Interoperability Planning
- Supportive of Integration
- Leverage opportunities to expand FHIM accessibility / usability and use by larger communities, e.g., HL7
- Repurpose efforts / Replace building models to build models via active engagements
- Acknowledge / enhance SME base, User Community Partnerships & Stakeholder Community Contacts to guide a shifting in commitments & to gauge progress.
Charter
CIMI will coordinate activities with other workgroups to establish aligned logical models and standards that support computable data-sharing in support of consistent health processes and achievement of improved patient outcomes. This coordination will encourage harmonized standards to manage data capture, clinical workflow and interoperability.
Products, Benefits and Contributions
The CIMI workgroup will coordinate with relevant groups related to
- Harmonized healthcare logical models, resulting in consistent computable implementation standards, profiles, extensions and guides to enable improvement in health care processes and patient health outcomes.
- CIMI curated Architecture (Principles, Reference Archetypes, Semantic-Anchor Patterns, Processes), documentation and training.
- Model driven development methodologies and tools related to HL7 standards and artifacts.
Projects
Plans
Principles
Approved
- CIMI Principles - Preferred Modelling Decisions
- Decisions are categorized as [principles], [process guide] or [style guide]
- Versions
- Mar 24, 2016 Version 12 was CIMI WG approved, pending “class” and “attribute” modeling style examples
- Mar 31, 2016 Version 13, adds “class” and “attribute” modeling style examples
- CIMI approved Detailed Clinical Models (DCMs) must be in a CIMI approved syntax: [style]
- ADL 2.X. – most current approved version
- AML – most current approved version
- An alternative syntax must be transformable into the CIMI Preferred syntax, e.g., RDF, LEGO.
- CIMI approved DCMs must use the most current approved CIMI core reference model. [style]
- CIMI approved DCMs must use CIMI reference archetypes where applicable. [style]
- Reference Archetypes are marked by a reference archetype annotation
- Reference Archetypes have names that are all uppercase in the ADL Workbench
- Reference Archetypes are Constrained from the CIMI Core Reference Model and can be constrained into a hierarchy of reusable CIMI Patterns to build CIMI leaf DCMs
- CIMI Clinical Information models support interoperability across a federation of enterprises by supporting transformations among the enterprises’ respective interface standards. [principle], such as
- CCDA, FHIR, NIEM, HL7 V2 or V3 messaging
- CIMI Clinical Information Models support semantic classification. [principle]
- E.g., A CIMI hemoglobin lab observation can be classified as a lab observation.
- CIMI supports iso-semantic alternatives for modeling the same clinical data. [principle]
- Iso-semantic models are models that have exactly the same information content, but the models differ in terms of structure and/or the degree of pre or post coordination of concepts that are used in the models.
- ACTION: define iso-semantic vs logically/semantically equivalent
- Models in a iso-semantic family can use different levels of pre and post coordination. A SNOMED-CT template can be a preferred representation to translate between the iso-semantic families for those parts of the model, which are covered in SNOMED-CT.
- Iso-semantic models are models that have exactly the same information content, but the models differ in terms of structure and/or the degree of pre or post coordination of concepts that are used in the models.
- The default CIMI preferred model is the most explicitly modeled (i.e., post-coordinated) member of an iso-semantic family. [principle]
- CIMI terminology binding principles:
- CIMI models must have complete terminology bindings before the models attain a status of “Complete” or “Ready for Trial Use.” [process guide]
- CIMI has obtained and will use a CIMI SNOMED CT Extension to create, track, and submit needed concepts to SNOMED CT. Concepts that are not appropriate for SNOMED CT will be submitted to other standard terminology developers. [process guide]
- CIMI models must be bound to standard terminologies: [principle. Subheadings are style guidance.]
- SNOMED CT relationship concepts will be used for the parent – child binding relationships.
- LOINC codes will be used for observation identifiers.
- SNOMED CT codes will be used for non-medication related clinical concepts in value sets.
- CIMI will specify one preferred unit of measure for models of physical quantities for use in accessing and storing data via services. SI units are preferred by default.
- The CIMI preferred strategy is to use SNOMED CT codes for units of measure in models, rather than a UCUM expression. Each unit of measure must have a single unique mapping to a valid UCUM expression. ### ### This strategy was chosen because it allows units of measure to be specified and constrained in the same manner as any coded field. However, for unit conversion, the related UCUM expression can be referenced from the code, and then UCUM unit conversion libraries can be used to convert to a new unit of measure.
- RxNorm codes will be used for medication related concepts temporarily; where, an International standard will be used, when available.
- Other standard codes and code systems will be approved as needed.
- CIMI model bindings will be informed by the SNOMED CT concept model where appropriate. [principle]
- Logical CIMI models will only include identifiers of value sets, not the enumerated list of allowed values. Value sets are configuration controlled separately from CIMI models. [style guide]
- CIMI is creating “computable logical models.” CIMI’s definition of “computable logical models” is: [process guidance]
- The models are algorithmically process-able (computable). It must be possible for the models to be translated algorithmically from one formal representation to another. CIMI logical models must support lossless round-trip logical transformations through CIMI approved representations.
- Hierarchical models classify the structural relationship of the model elements (containment).
- Coded elements have explicit binding to allowed value sets of coded values.
- Models are independent of any specific programming language, implementation technology, or type of database.
- The models must support explicit, unambiguous query statements against data instances.
- Models may support inclusion of “processing knowledge” (default values, etc.).
- One or more examples of logical instance data will be created for each model or class of models. [style guide]
- The examples will show both proper and improper use
- Values for codes and for value set identifiers will always be represented within the model using URIs. [style guide]
- CIMI preferred Modelling style: [principle]
- CIMI archetypes include all valid clinical requirements, regardless of prevalence of use; where, CIMI architypes may exclude source requirements deemed to be implementation-design constraints.
- The CIMI preferred models include all possible attributes (maximal set of data elements) for which there is a valid use case; that is, CIMI models are superset reference models. [principle]
- CIMI prefers the “class modeling style” or “specialization by constraint style” whereby model nodes are constrained by changing the name of the node or attribute in the model; where, the usual modeling style most archetype modelers use is the Class modeling style; where, not only the names/concepts change; but also, the structure of the model can change.
- In the Class modeling style archetypes are specialized by changing the name of a node or add or remove structures.
- EXAMPLE: The node has a name and the data field holds for instance a number as result.
- <Node: LabTest> has result <a number>. When this gets specialized, the node name changes and so does its meaning
- <Node: LabTest Blood Glucose Measurement> has result < a number>
- An alternative “attribute modeling style” or “LEGO modeling style” is to constrain nodes by changing the value of an attribute (e.g., SNOMED descriptor) in the model; where, nodes get their meaning from the name they get and/or annotations.
- The Attribute modeling style is used because of the fact that the archetypes (clinical models) need more rigor and are constructed using re-usable patterns. In this modeling style the archetype stays fixed.
- <Node: NAME> has value <LabTest>
- <Node: RESULT> has value <a number>
- When this gets specialized the node names are not changed. Only one data field is changed.
- <Node: NAME> has value <LabTest: Blood Glucose Measurement>
- <Node: RESULT> has value <a number>
- [Example provided by Gerard Freriks, March 2016]
- a clean separation of clinical model semantics [Aug 2016]
- using SNOMED, LOINC and RxNORM
Pending
- ASSERTION vs. EVALUATION_RESULT criteria
- from 2017-02-02 minutes
- 'Reasoning' vs. 'Finding', 'Subjective' vs. 'Objective', 'Fact-ish' vs. 'Judgement-ish' categories work > 80% of the time; but, they are not reliable criteria for a small set of "edge cases'.
- In most cases it is obvious, when to use ASSERTION (e.g., 'Reasoning', 'Subjective', 'Judgement-ish' things, such as DIAGNOSIS, PROBLEM, COMPLAINT, FAMILY_HISTORY)
- The Patient DISCHARGE_DIAGNOSIS is ... (implying the set of findings defining the DISCHARGE_DIAGNOSIS)
- John has blue eyes
- In the small number of cases, where it is not obvious when to use ASSERTION, CIMI prefers
- ASSERTIONS be used when the answer to an EVALUATION_RESULT is 'Present' or 'Absent', 'Yes' or 'No', 'True' or 'False', etc.
- Although theoretically possible; but for practical implementation reasons, CIMI does not support round-trip conversion between EVALUATION_RESULT and ASSERTION structures, as shown by the set of ATTRIBUTE vs. EVALUATION_RESULT attributes shown above.
- In most cases it is obvious, when to use ASSERTION (e.g., 'Reasoning', 'Subjective', 'Judgement-ish' things, such as DIAGNOSIS, PROBLEM, COMPLAINT, FAMILY_HISTORY)
Out of Scope
- OUT OF SCOPE: Implementations characteristics are out of scope.
- CIMI is not directly concerned with wire formats. [principle]
- Realms may choose non-CIMI preferred units of measure and terminology for communications; where, it is the realm’s responsibility to have an equivalent concept in their terminology and to produce the mapping to the standard code.
- Implementations of user facing point-of-capture and point-of-use applications may use any units of measure or terminologies that they like, as long as communications use CIMI preferred SI units and standard terminologies. [principle, style guide/implementation guidance]
- Transformation fidelity (e.g., Millimeters to whole inches may be imprecise, inches to lb. /sq. ft. may be meaningless) and safety as a whole are design specifications, beyond CIMI’s scope.
Legends
UML
- UML models are being used for CIMI BMM; where, UML relationships are shown above:
- Many figures were done in the FreeMind open-source Mind Maps; where, the legend, download information and basic structure are given below.
Mind Maps
Architectural Framework
The CIMI Architecture consists of the three Basic Meta Model (BMM) Reference Model layers and two Archetype layers shown here.
The CIMI Reference Model is expressed using the OpenEHR Basic Metamodel (BMM) Language. The archetype layers are expressed using the OpenEHR Archetype Definition Language (ADL). While reference model modules define classes, attributes, and class hierarchies, the archetype layers only specify progressive constraints on the reference model but do not introduce new classes, attributes, and class-class relationships.
- The CIMI Core BMM Reference Model provides the core granularity of the CIMI model and introduces its top-level classes such as the DATA_VALUE class and the LOCATABLE class. This reference layer module defines the CIMI primitive types and core data types.
- The CIMI Foundational BMM Reference Model is closely aligned to ISO13606 and the OpenEHR Core Reference Model. It defines foundational CIMI clinical documents and clinical record patterns. It also introduces the PARTY, ROLE, and PARTY_RELATIONSHIP patterns and defines the top-level CLUSTER class for complex CIMI type hierarchies. CQI Knowledge Artifacts may also leverage this layer.
- The CIMI Clinical BMM Reference Model consists of the classes derived from existing CIMI archetypes, the FHIM, QUICK, vMR, and QDM. This layer defines the set of 'schematic anchors' (to borrow Richard Esmond's term) or core reference model patterns from which all CIMI archetype hierarchies and ultimately Detailed Clinical Models (DCMs) derive. Requirements for this layer come from FHIM, vMR, QDM, QUICK, FHIR US Core, SDC, etc...
- The 'goal' is to define the reference models with low FHIR transformation costs where feasible noting that we will inherently have some divergence due to the different requirements underlying both models.
- Galen points out that, FHIM’s expressivity will not carry over to CIMI DCMs given the models' different requirements (e.g., FHIM includes finance and accounting).
- The CIMI Foundational Archetype Patterns define the top-level constraints on the CIMI Reference Model. These typically consist of attribute formal documentation and high level attribute semantic and value set bindings. Archetypes at this layer will provide the foundational requirements for future US Core and QI Core profiles. Future pilots will explore the generation of US Core and QI Core archetypes from these CIMI archetypes.
- The CIMI Detailed Clinical Model Layer represents the set of leaf-level constraining profiles on the foundational archetypes to create families of archetypes that only vary in their finest terminology bindings and cardinality constraints. This layer is intended to support clinical interoperability through an unambiguous specification of model constraints for information exchange, information retrieval, and data processing.
From layers 1-5, we define the set of transformations (e.g., SIGG (MDHT, MDMI)) to generate the corresponding FHIR profiles including the US Core and QI Core profile sets. Note that FHIR profiles can be generated from the various levels of the archetype hierarchy depending on requirements. The lower down in the hierarchy, the more prescriptive the profile is in terms of constraints. Much like ADL Archetypes, FHIR profiles can be layered.
It is important to note that some FHIR profiles may be derived from the Foundational Archetype Layer (e.g., US Core, some QI Core profiles, some CQIF profiles on PlanDefinition, Questionnaire and ActivityDefinition, etc...) and others from the DCM Layer (e.g., bilirubin, HgA1c, etc...). In other words, the arrow for FHIR Profiles stems out of the outer box rather than the last of the inner boxes (the DCM box).
BMM Hierarchy
The CIMI Reference Model is done in UML and contains three Basic Meta-Model (BMM) hierarchical layers of Pattern structures aka Clinical Pattern structures:
- Each Pattern contains a single class or group of related classes that can be constrained by ADM or AML archetypes in order to define a family of related and consistent Detailed Clinical Models (DCMs), such as types of
- Lab Orders,
- Procedures,
- Skin Wounds, etc.
- The three layer CIMI Reference Model contains modular sets of (Clinical) Patterns, which can be used to create leaf-level DCMs:
- Core BMM Reference Model Level-1 defines core types and two root classes:
- Data Types
- Data Value Types
- LOCATABLE class, from which the majority of CIMI domain classes derive and
- ASSOCIATION_CLASS from which we derive
- Foundational BMM Reference Model Level-2 defines the foundational underpinnings of the CIMI model.
- This structure aligns with the ISO 13606 EHR and the OpenEHR Reference Models.
- The Foundation Reference Model defines the top-level hierarchies to derive lower-level classes and clinical patterns:
- CLUSTER,
- COMPOSITION,
- CONTENT,
- PARTY,
- ACTOR,
- ROLE,
- PARTICIPATION, and
- PARTY_RELATIONSHIP.
- Clinical BMM Reference Model Level-3 builds upon the Level-1 Core and Level-2 Foundation to specify the Level-4 CIMI Preferred Archetypes aka Semantic Anchors for DCMs.
- Core BMM Reference Model Level-1 defines core types and two root classes:
- The CIMI Core and Foundational reference modules provide the core semantics, structure, and granularity of the CIMI model.
- the CIMI Clinical Reference Model module provides an intuitive domain semantic-anchor view for DCMs.
- This modular approach allows for
- additional, domain-specific Level-3 Reference Archetypes and Level-4 Patterns
- alternate iso-semantic patterns to be introduced at the appropriate level in the model.
- Over time, it can be expected that the layers will hierarchically become more stable
- Level-1 Core BMM purposely being most stable.
- Level-2 Foundation BMM might change, such as when new underlying taxonomy-structures are added.
- Level-3 Clinical BMM might change, such as when new clinical disciplines and data-structures are added.
- Level-4 Reference Archetypes changing, such as when new domains are added.
- Level-5 DCMs under a constant-state of flux, such as when new information-exchange requirements are added.
- If change occurs, it should be backward-compatible with-respect-to lower layers and legacy-DCMs.
Archetype Hierarchy
The CIMI archetype hierarchies form the second part of the CIMI model. These hierarchies serve two primary purposes:
- They enable the progressive application of constraints on reference clinical patterns including the specification of terminology constraints that assign formal meanings to both model attributes and their range.
- They allow for the definition of sets of models whose members vary solely based on the constraints they apply to a common underlying reference model pattern. Archetypes can specialize more general archetypes in ADL. They do so by progressively constraining the underlying reference model pattern in a manner that is consistent with and not contradictory to the constraints specified in archetypes higher up in the hierarchy. Examples of constraint refinements are listed below:
- A top-level archetype restricts the range of Ingredient.substanceCode to the set of all concepts subsumed by the SNOMED CT concept ‘Pharmaceutical/biologic product’. A downstream specialization of this archetype restricts the Ingredient.substanceCode to ‘Metoprolol’.
- A top-level archetype assigns the SNOMED CT concept ‘Procedure site (attribute)’ as the semantic binding of the attribute Procedure.site. A downstream specialization of this Detailed Clinical Models (DCMs), highly specific models that enable the interoperable exchange of clinical information, typically reside at the leaf-level of CIMI archetype hierarchies. The cumulative constraints applied on a DCM are intended to be precise enough to allow for the unambiguous exchange of interoperable clinical information and thus constitute highly specific constraints on the underlying reference model pattern.
Introduction
Core Modeling Principles
The following principles guide CIMI’s modeling approach:
- CIMI favors a design by specialization over a design by constraint approach. This approach is summarized as follows:
- if a class has a number of specializations, each requiring a different set of attributes, common attributes are represented in the parent class while child attributes are added to the appropriate specializations. An alternative approach may be to include the union of all attributes in a single class and constrain attributes out at the archetype level.
- The former approach is preferred over the latter except in certain cases.
- For instance, if a specialization differs from its parent by a single attribute, the inclusion of the attribute in the parent class may be preferred over the creation of a new class.
- if a class has a number of specializations, each requiring a different set of attributes, common attributes are represented in the parent class while child attributes are added to the appropriate specializations. An alternative approach may be to include the union of all attributes in a single class and constrain attributes out at the archetype level.
- CIMI generally favors the definition of explicit attributes in the reference model over the slicing of lists in archetype definitions. The attribute subset pattern is achieved by defining a multi-cardinality attribute in the reference model and specifying subsets of the list elements in archetypes.
- For instance, one may specify that the LOCATABLE class, the supertype of all CIMI classes, has an attribute called participation of type PARTICIPATION and whose cardinality is 0..*.
- In an archetype, one may then constrain the participation attribute in the following manner.
- The first element of the list represents the author.
- The second element represents the data enterer.
- The third element represents the location where the authoring activity took place.
- The fourth element of the list represents the system where the information was recorded.
- While such subsets are allowed in both UML and ADL, CIMI generally avoids their use and favors the explicit representations of such subsets as full-fledged attributes in the model. For instance, CIMI explicitly adds an attribute for the
- agent of an activity,
- the location of an activity,
- the entity involved in the performance of the activity, and so on.
- The motivation for this approach stems from the fact that CIMI is a logical model rather than a physical model and favors greater reference model expressivity over physical patterns that enable better economies of structure.
- CIMI may offer a number of variants for a given attribute.
- For instance, CIMI defines bodyLocation: AnatomicalLocation and bodyLocationPrecoord:
- CODED_TEXT to support both a coded and a post-coordinated anatomical location.
- Similarly, Assertion.dueToCode:CODED_TEXT and Assertion.dueTo:
- ClinicalStatement allow users to link an assertion to another clinical statement or simply define its type to be CODED_TEXT.
- Archetypes will need to specify a single property in such cases in order to avoid semantic collision.
- For instance, CIMI defines bodyLocation: AnatomicalLocation and bodyLocationPrecoord:
Model Restructuring Guidelines
- Align/Harmonize CLIM (SOLOR, FHIM, CQF, CEMs, DCMs, FHIR)
- Simplify models (managing complexity) to provide real-world clinical-data interoperability by
- Separating the CIMI Reference Model into 5 layers
- Eliminate duplication and separate structure from semantics #### using SOLOR terminology with SNOMED Expression
- Reference BMM is constructive consisting of more specific sub-classes of the higher-level models; and where
- ADL or AML Archetypes are constrained subclasses of the Reference BMM Semantic Anchors.
- Conceptual Mind Maps are used to present the big-picture
- BMM UML is used to derive the FHIM-DCM touchpoints
- Clinical Archetypes
- Separating the CIMI Reference Model into 5 layers
- Restructure FHIM, DCMs, CQF in-accordance-with CIMI BMM “Semantic Anchors”
- The CIMI Core, Foundational and Clinical Reference Model BMM; where,
- Semantic Anchors are BMM leaves (FHIM-DCM and CQF-DCM touch-points) used to specify DCMs
- Modify the models so they’are semantically consistent
- Align CIMI BMM with FHIR Core, US Core and FHIR data types
- Eliminate duplication and separate structures from semantics, using SOLOR terminology with SNOMED Expressions
- Each lower-level model (Reference BMMs and Architype models has to be consistent ; where,
- they provide clinically-specific building blocks for the “leaf” DCM archetypes that will actually be used for defining/constraining clinical data in FHIR, CDA, etc.
- Reference BMM is constructive consisting of more specific sub-classes of the higher-level models; and where
- ADL or AML Archetypes are constrained subclasses of the Reference BMM Semantic Anchors.
- As an example: The Data classes associated-with EvaluationResult-Quantitative-Lab includes SerumGlucose Class and its value sets
- The advantage is that the above maximize interoperability and minimize tooling mapping requirements
- Ideally, the CIMI logical model leaf nodes are FHIR Structure Definitions and no mapping is required.
- Document and Communicate CIMI Reference Architecture (BMM and Architypes)
- with further explanation and justification of
- Modes’ complex layers and how they specifically fit together and are all needed
- How the models and tools provide real-world clinical data interoperability
- In support of Federated model development and governance
- with further explanation and justification of
- Simplify models (managing complexity) to provide real-world clinical-data interoperability by
Terminology Alignment
Information models are often developed independently of clinical ontologies. As a result, many information models align poorly with the terminologies or ontologies upon which they ultimately depend for their formal semantics. Moreover, by not explicitly specifying the model’s semantics, the meaning of the model is left open for interpretation during implementation further hindering interoperability. In an effort to better align models of use with models of meaning, the Clinical Information Model is designed to align closely with the SNOMED CT Concept Model wherever such an overlap exists. In CIMI, the model’s formal semantics are specified through terminology bindings defined at the archetype level. These terminology bindings occur at three levels:
- To define the relationship between the attribute and its class. CIMI model attributes are aligned with their corresponding SNOMED CT concept model attributes when such a correspondence exists.
- An example in the CIMI Finding Assertion Model, the body site data element aligns with the SNOMED CT concept 363698007|Finding site (attribute)|from the SNOMED CT Clinical finding concept model.
- To define the semantics that the attribute can contain. CIMI model attribute ranges are aligned with the ranges specified for their corresponding SNOMED CT concept model attribute when such a correspondence exists. Using the example above, the range for the Body Site is the range defined in the SNOMED CT technical guide for Finding Site Anatomical or acquired body structure | 442083009 (<<)
- To define the post-coordinated representation of some of the semantics of the archetype using the SNOMED CT concept model. CIMI preferred models favor post-coordination in the model rather than in the terminology.
- In some cases, CIMI archetypes may be associated with SNOMED CT expressions, provided that the expression conforms to the constraints specified for the flattened archetype.
- For instance, a CIMI Clinical Statement may be associated with a SNOMED CT Situation with Explicit Context expression or a pre-coordinated code.
- We are currently investigating the use of SNOMED CT Templates for such bindings
Core BMM
The CIMI Core BMM Reference Model provides the core granularity of the CIMI model and introduces its top-level classes such as the DATA_VALUE class and the LOCATABLE class. This reference layer module defines the CIMI primitive types and core data types.
Foundation BMM
The CIMI Foundational BMM Reference Model is closely aligned to ISO13606 and the OpenEHR Core Reference Model. It defines foundational CIMI clinical documents and clinical record patterns. It also introduces the PARTY, ROLE, and PARTY_RELATIONSHIP patterns and defines the top-level CLUSTER class for complex CIMI type hierarchies. CQI Knowledge Artifacts may also leverage this layer.
Clinical BMM
- The CIMI Clinical BMM Reference Model consists of the classes derived from existing CIMI archetypes, the FHIM, QUICK, vMR, and QDM. This layer defines the set of 'schematic anchors' (to borrow Richard Esmond's term) or core reference model patterns from which all CIMI archetype hierarchies and ultimately Detailed Clinical Models (DCMs) derive. Requirements for this layer come from FHIM, vMR, QDM, QUICK, FHIR US Core, SDC, etc...
- The 'goal' is to define the reference models with low FHIR transformation costs where feasible noting that we will inherently have some divergence due to the different requirements underlying both models.
- Galen points out that, FHIM’s expressivity will not carry over to CIMI DCMs given the models' different requirements (e.g., FHIM includes finance and accounting).
Clinical_Statement Overview
Clinical_Statement (Top View)
Clinical_Statement-Topic
Clinical_Statement-Association
Clinical_Statement-Context
Clinical_Statement-Data_Packages
Foundation Archetypes
- The CIMI Foundational Archetypes Patterns define the top-level constraints on the CIMI Reference Model. These typically consist of attribute formal documentation and high level attribute semantic and value set bindings. Archetypes at this layer will provide the foundational requirements for future US Core and QI Core profiles. Future pilots will explore the generation of US Core and QI Core archetypes from these CIMI archetypes.
Detailed Clinical Models (DCMs)
- The CIMI Detailed Clinical Model Layer represents the set of leaf-level constraining profiles on the foundational archetypes to create families of archetypes that only vary in their finest terminology bindings and cardinality constraints. This layer is intended to support clinical interoperability through an unambiguous specification of model constraints for information exchange, information retrieval, and data processing.
Skin-Wound DCM
- 2917-02-09-1000 ET Patient Care Workgroup Telecom
- Attendees: Jay, Susan, Richard, Claude, Steve
- Skin Wound content & scope
- Braden
- Skin Assessment
- Wound Assessment, with Pressure Ulcer specialization
- No Skin Risk Assessment (out of scope)
- Schedule
- Feb 13: Requirements UML and Terminology spreadsheet finished
- Feb 13 to Mar 3 - VA verification and validation of spreadsheet
- Diagram
- Data-Element and Value-Set Spreadsheet
- Mar 8: Presented at LOINC conference by Susan
UML
Mind Map
Tools
FHA sponsored FHIM and SIGG (MDHT and MDMI) have the capability for generating FHIR implementation models. With the adoption of CIMI information requirements (informed by FHIM), SIGG can generate CIMI archetypes and FHIR Structure Definitions (FSDs) and compare them to their source archetypes to confirm the process.
- FHIM & MDHT could then serve as one of the “translator” tools.
- MDMI can serve as one of the "mapping" tool.
- Part of the tool authoring activity is to add new SOLOR terminology content as necessary to meet requirements derived from existing specifications; where,
- there is a versioning and publication step between the SOLOR box/layer and the CLIM box/layer.
- there is a versioning and publication step between the CLIM box/layer and MDHT/MDMI; where, the arrows metaphor conveys the publication step.
- IHTSDO workbench with ISAAC plugin authoring tools are in the SOLOR box/layer.
- ADL workbench, enterprise architect UML tool, etc. need to be able to import SOLOR content, so they can build the profiles using the SOLOR terminology foundation…
- SOLOR (SnOmed LOinc, Rxnorm) terminology authoring project can provide the terminology foundation for FHIM, CQF, DCMs and FHIR profile and extension development. SOLOR creates Lightweight Expression of Granular Objects (LEGOs) with description-logic semantics aka SNOMED expressions; where, SOLOR can be treated as a single, coherent terminology systems that covers essential healthcare domains.
- FHIM is FHA's Federal Healthcare Information Model, which is a high-level logical healthcare model, which covers approximately 36 clinical domains and has been vetted by Federal Agency SMEs and clinicians. Details are available at www.FHIMS.org
- CIMI is Clinical Information Model Initiative which defines Terms-of-Reference AKA Principles, modeling style guidelines, a CIMI Core Reference Model, Reference Archetypes, Patterns and Detailed Clinical Models (DCMs); where, a CIMI Model is a clear, complete, concise, correct and consistent logical semantic-and-syntactic description of a healthcare concept, which can be instantiated as a computable implementation object that is interoperable among systems.
- CQF is Clinical Quality Framework to support Continuous Quality Improvement (CQI) with a Quality Improvement and Clinical Knowledge or QUICK data model, Clinical Quality Language (CQL) supporting clinical decision support (CDS) and clinical quality measures (CQM).
- FHIR defines a set of "Resources" that represent granular clinical concepts; where, CIMI's CLIM and tooling can be used to create consistent FHIR and other implementation paradig profiles and extensions. SIGG creates FHIR Structure Definitions (FSDs); where, FHIR tools can convert FSDs into FHIR Resource extensions and profiles. FHIR Core Resources, Profiles and Extensions can be managed in isolation, or aggregated into complex documents.
The following is a list of authoring tools that might be pertinent to investigate as we develop CIMI tooling:
- Terminology Browsers
- Value Set Editors
- CIMI Model Authoring Tool
- ADL 2.0 web based archetype and template editors
- Results 4 Care tool for online authoring of clinical content for Detailed Clinical Models
- Results 4 Care UML template and Model creation / validation tool for Detailed Clinical Models
- [Spanish ADL Authoring Tool from Spain (Gerard Freriks to provide info)]
- FHIR Profile Editors
- CIMI to FHIR Profile Conversion
- CIMI (mini)RM UML
- Sparx Enterprise Architect Project 3.0.5 EAP
- BMM Extension
References
- 2016 CIMI-Sponsored HL7 IIM&T Investigative Study
- HL7 Project Scope Satement: https://1drv.ms/w/s!AlkpZJej6nh_k9dYlvNWaZ3DLPKSYg
- Briefing Slides: https://1drv.ms/p/s!AlkpZJej6nh_k9dE-b_DAO8HSNNT6Q
- Final Report, Sep 2016: https://1drv.ms/w/s!AlkpZJej6nh_k9dQ2qQnRuQM8gbu8A
- Technical Forum Summary, Aug 2016: https://1drv.ms/w/s!AlkpZJej6nh_k9gyRVADgOvM5SlJkQ
- Preliminary Report, Aug 2018 https://1drv.ms/w/s!AlkpZJej6nh_k9YPmsR8Hl6zTlQ0NQ
- Note that many networks block the use of clickable links; where,
- You must copy the link into a browser to access the content.
- If links don’t work on a VPN (e.g., DoD and VA networks), try accessing them directly (without VPN)
- Jan 2017 CIMI Architecture, Methodology and Style Guide from Ballot
- Clinical Element Models (CEMs)
- CEM Browser
- ClinicalElement CIMI Browser Models published in a web browser, processed by ADL workbench and available as ADL, XML, JSON, graphical tree, etc
- GitHub CIMI Models managed in Git version control repository: GitHub
- Browser pubs periodically refreshed from GitHub & may be out of synch
- CIMI Overview Slides by Stan, 5/19/16
- CIMI Reference model requirements
- CIMI Artefacts on GitHub
- CIMI Wiki@Mayo (2010-2015)
- CDS WG Wiki
- CDS Standards Wiki
- CQI wiki
- Clinical Observation Modelling by Walter Sujansky Jan 31, 2017
- EHR WG Wiki
- FHIM website
- HSPC website
- FHIR Website
- FHIR Infrastructure Wiki
- ISO 13606 Information architecture for communicating EHRs
- Part 1: Reference Model and Data types
- Part 2: Archetype Object Model v2.0
- Part 3: Terminologies
- Part 4: Information security
- Part 5: Messaging
- ISO 13940 ConSys, ISO 13967 HISA, SIAMM
- ISO 13972 Detailed Clinical Models(DCMs)
- MDHT website
- MDMI website
- MAX Artefacts
- Open Group Healthcare Forum
- OpenEHR and ADL language and tools
- Patient Care Wiki
- SNOMED Training Materials
- STAMP Overview, 1/15/17
- VOCAB Wiki
Jan - Sept CIMI Investigative Study / Task Force Supporting documents