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Specimen
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Contents
Scope of Specimen Project
The scope of the project is to:
- Complete DAM incorporating various use cases (OO, CG, II, AP)
- Complete Specimen V3 models based on other use cases (CG, II, AP)
- Consider V2 Updates
- Support Specimen Identifier formats as further established by AP workgroup
Leadership
Topic leads:
- Review/refine DAM – Joyce Hernandez, Mukesh Sharma
- Starting point: NCI Life Sciences DAM: Specimen Core.
- V3 CMET/RMIM compare + updates – Lorraine Constable
- V2 SPM compare + updates – Riki Merrick, Hans Buitendijk
- Validate Specimen Identifier format support - TBD
Conference Calls and Minutes
- Dates: Every other Thursday, starting Feb 16, 2012
- Time: 12:00 - 13:00 EST
- Phone: +1 770-657-9270
- Passcode: 653212
- Webex: http://www.mymeetings.com/siemens/nc/join.php?i=741301183&p=&t=c
- Passcode: HL7OO
- List Serve: specimen@hl7.lists.org
Minutes
Working Documents
Use Cases
- Clinical Sequencing Project - Identified Use Cases to Consider in Specimen CMET - from CG ClinSeq.doc
- Specimen Use Case for Isolate Representation
- Medical Research Use Case and Specimen Core Diagram Media:Specimen-Core Model Diagram and Medical Research Use Case Process Flow.xls
- Origin of Specimen
- Need to indicate whether the specimen is human, animal, soil, etc.
- For viral genetics where DNA/RNA can be extracted from a micro-organism.
- Notes from May WGM
- II perspective mainly interested in specimen in context of interventional imaging
- existing DICOM supplement (122) we should take into consideration which details specimen information, primarily from AP perspective
- will add a link to our project page to DICOM supplement
Status & Deliverables
Links
LS DAM Wiki: https://wiki.nci.nih.gov/x/cxRlAQ LS DAM Overview: https://wiki.nci.nih.gov/download/attachments/76677702/LSDAMSpecimenHL7OO.pptx LS DAM (Enterprise Architect) : https://wiki.nci.nih.gov/download/attachments/23401587/LSDAMWorking.EAP LS DAM (HTML): http://ncientarch.info/sandbox/LSDAM2_2_2/EARoot/EA3/EA1/EA1/EA1/EA1/EA1/EA4/EA157.htm
