Difference between revisions of "Specimen"

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== OLDER DOCUMENTATION: ==
 
== OLDER DOCUMENTATION: ==
== Conference Calls and Minutes ==
+
=== Conference Calls and Minutes ===
 
*Dates: Every other Thursday, starting Feb 16, 2012
 
*Dates: Every other Thursday, starting Feb 16, 2012
 
**Time: 12:00 - 13:00 EST
 
**Time: 12:00 - 13:00 EST
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* List Serve: specimen@hl7.lists.org
 
* List Serve: specimen@hl7.lists.org
  
== Minutes==
+
=== Minutes===
  
 
*[[File:SPM_Minutes_20120216_ConCall.doc|Minutes 20120216 ConfCall]]
 
*[[File:SPM_Minutes_20120216_ConCall.doc|Minutes 20120216 ConfCall]]
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*[[File:SPM Minutes 20141016 ConCall.docx|Minutes 20141016 ConfCall]]
 
*[[File:SPM Minutes 20141016 ConCall.docx|Minutes 20141016 ConfCall]]
  
==Working Documents==
+
===Working Documents===
===Use Cases===
+
====Use Cases====
 
* Clinical Sequencing Project - Identified [[Use Cases to Consider in Specimen CMET - from CG ClinSeq.doc]]
 
* Clinical Sequencing Project - Identified [[Use Cases to Consider in Specimen CMET - from CG ClinSeq.doc]]
 
* [[Specimen Use Case for Isolate Representation]]
 
* [[Specimen Use Case for Isolate Representation]]
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** Detailed specimen information can be found in DICOM Part 3 (available free at ftp://medical.nema.org/medical/dicom/2011/11_03pu.pdf). This information that has been specified by DICOM WG26 "Pathology" (DICOM Supplement 122 "Specimen Identification and Revised Pathology" Project) should be taken into consideration in the project.
 
** Detailed specimen information can be found in DICOM Part 3 (available free at ftp://medical.nema.org/medical/dicom/2011/11_03pu.pdf). This information that has been specified by DICOM WG26 "Pathology" (DICOM Supplement 122 "Specimen Identification and Revised Pathology" Project) should be taken into consideration in the project.
  
==Status & Deliverables==
+
===Status & Deliverables===
===Ballot Reconciliation Editing===
+
====Ballot Reconciliation Editing====
 
Ballot spreadsheet for tracking work assignment - PLEASE do NOT filter on the google doc, as it affects the entire document, rather download and work in your local copy and then update the google spreadsheet afterwards: [https://docs.google.com/spreadsheets/d/1j9X6pMdBZ4Cs9nY4pMqyJKG9cOcI5eIoZhY95ymzwEQ/edit#gid=917128157|google spreadsheet]
 
Ballot spreadsheet for tracking work assignment - PLEASE do NOT filter on the google doc, as it affects the entire document, rather download and work in your local copy and then update the google spreadsheet afterwards: [https://docs.google.com/spreadsheets/d/1j9X6pMdBZ4Cs9nY4pMqyJKG9cOcI5eIoZhY95ymzwEQ/edit#gid=917128157|google spreadsheet]
  
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Editor for Model: Lorraine Constable - file is here:  [[http://www.hl7.org/documentcenter/public/wg/orders/V3_DAM_Specimen_R1_2014May_ModelFile.zip]]
 
Editor for Model: Lorraine Constable - file is here:  [[http://www.hl7.org/documentcenter/public/wg/orders/V3_DAM_Specimen_R1_2014May_ModelFile.zip]]
  
===Draft Model===
+
====Draft Model====
 
Specimen Model in Gforge: http://gforge.hl7.org/gf/project/orders/scmsvn/?action=browse&path=%2Ftrunk%2FPOSP%2FDAM%2F
 
Specimen Model in Gforge: http://gforge.hl7.org/gf/project/orders/scmsvn/?action=browse&path=%2Ftrunk%2FPOSP%2FDAM%2F
  
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[[image:Org.hl7.oo.Specimen.information.cim.png]]
 
[[image:Org.hl7.oo.Specimen.information.cim.png]]
  
==Links==
+
===Links===
 
LS DAM Wiki: https://wiki.nci.nih.gov/x/cxRlAQ
 
LS DAM Wiki: https://wiki.nci.nih.gov/x/cxRlAQ
  

Revision as of 17:18, 1 July 2015

Back to Orders & Observations WG main page

Back to OO Projects page

Scope of Specimen Project

The scope of the project is to:

  • Complete DAM incorporating various use cases (OO, CG, II, AP) - see publication:
  • Complete Specimen V3 models based on other use cases (CG, II, AP)
  • Consider V2 Updates
  • Support Specimen Identifier formats as further established by AP workgroup
  • Harmonize with BRIDG Model (biologic specimen)
  • Address issues encountered by IHE AP when applying the Specimen DAM to CDA during development of Anatomic Pathology Structured Report (APSR)

Leadership

  • V3 CMET/RMIM compare + updates – Lorraine Constable
  • V2 SPM compare + updates – Riki Merrick, Hans Buitendijk
  • Validate Specimen Identifier format support - TBD
  • BRIGD Harmonization - Ed Helton, Riki Merrick
  • IHE-AP ASPR work - Gunter Haroske

Conference Calls and Minutes

  • Dates: Every other Wednesday, starting July 1, 2015
    • Time: 10:00 - 11:00 AM EST = 21:00 UTC
  • Phone: +1 770-657-9270
    • Passcode: 398652#
  • Webex: https://join.me/vernetzt.us
  • List Serve: specimen@hl7.lists.org

Minutes


Reference Documents

Working Documents

We will either post the comparison artifacts here or post a link to where they can be found

Links

BRIDG Model information: www.bridgmodel.org


OLDER DOCUMENTATION:

Conference Calls and Minutes

Minutes

Working Documents

Use Cases

Status & Deliverables

Ballot Reconciliation Editing

Ballot spreadsheet for tracking work assignment - PLEASE do NOT filter on the google doc, as it affects the entire document, rather download and work in your local copy and then update the google spreadsheet afterwards: spreadsheet

Balloted document section: use cases File:V3 DAM SPECIMEN R1 I1 2014MAY UseCases.docx - Lori Dieterle

Balloted document section: Tables with definitions File:V3 DAM SPECIMEN R1 I1 2014MAY DefinitionTables.docx - Kathy Walsh

File:V3 DAM SPECIMEN R1 I1 2014MAY DefinitionTables section2.docx - Mark Jones

Section 3 - Riki Merrick - is covered in entire document file

Editor for entire document: [[1]] members only site Riki Merrick

Editor for Model: Lorraine Constable - file is here: [[2]]

Draft Model

Specimen Model in Gforge: http://gforge.hl7.org/gf/project/orders/scmsvn/?action=browse&path=%2Ftrunk%2FPOSP%2FDAM%2F

Definitions spreadsheet: File:Specimen DAM classes and attributes with notes.xlsx

  • snapshot of Draft Model work in progress (draft model on the left, excerpts from NCI LSDAM on the right):

Org.hl7.oo.Specimen.information.cim.png

Links

LS DAM Wiki: https://wiki.nci.nih.gov/x/cxRlAQ

LS DAM Overview: https://wiki.nci.nih.gov/download/attachments/76677702/LSDAMSpecimenHL7OO.pptx

LS DAM (Enterprise Architect) : https://wiki.nci.nih.gov/download/attachments/23401587/LSDAMWorking.EAP

LS DAM (HTML): http://ncientarch.info/sandbox/LSDAM2_2_2/EARoot/EA3/EA1/EA1/EA1/EA1/EA1/EA4/EA157.htm