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In addition, Clinical Genomics will seek to assure that related or supportive standards produced by other HL7 groups are robust enough to accommodate their use in both research and clinical care use. The group will also monitor information interchange standards developed outside HL7, and attempt harmonization of information content and representation of such standards with the HL7 content and representation.
 
In addition, Clinical Genomics will seek to assure that related or supportive standards produced by other HL7 groups are robust enough to accommodate their use in both research and clinical care use. The group will also monitor information interchange standards developed outside HL7, and attempt harmonization of information content and representation of such standards with the HL7 content and representation.
  
====Formal Relationships with Other HL7 Groups====
+
===Formal Relationships with Other HL7 Groups===
 
This Work Group will coordinate with a large number of other Work Groups in order to accomplish its mission. Strongest relationships will be with:
 
This Work Group will coordinate with a large number of other Work Groups in order to accomplish its mission. Strongest relationships will be with:
 
* Orders and Observation
 
* Orders and Observation
 +
* Anatomic Pathology
 +
* Image Integration
 
* Clinical Statement
 
* Clinical Statement
 
* Clinical Decision Support  
 
* Clinical Decision Support  
* Regulated Clinical Research Information Management
 
* Orders and Observations
 
 
* Patient Care
 
* Patient Care
 
* Electronic Health Records
 
* Electronic Health Records
 
* Modeling and Methodology
 
* Modeling and Methodology
 
* Structured Documents
 
* Structured Documents
====Formal Relationships with Groups Outside of HL7====
+
 
 +
===Formal Relationships with Groups Outside of HL7===
  
 
===Decision Making===
 
===Decision Making===
See Work Group Decision Making Documents[http://www.hl7.org/Special/Committees/decisionmaking.cfm] (''Date of Last Revision: Final March 2, 2009'')
+
See Work Group Decision Making Document:
 +
 
 +
http://www.hl7.org/Special/Committees/decisionmaking.cfm
 +
 
 +
''Date of Last Revision: Final March 2, 2009''
  
 
==Conference Calls, Agendas and Minutes==
 
==Conference Calls, Agendas and Minutes==
 
   
 
   
====Web and Teleconference(default)====
+
===WGM Agenda and Minutes===
WebEx meeting link for the Tuesday 11 AM EST call is https://intermountainmeetings.webex.com/intermountainmeetings/j.php?J=626592744.
+
http://wiki.hl7.org/index.php?title=CG_Working_Group_Meeting_Minutes
 +
 
 +
===Web and Teleconference(default)===
 +
The weekly calls are on on Tuesday's at 11 US Eastern Time.
 +
 
 +
Minutes:
 +
https://docs.google.com/document/d/12-uBrMmav71a3_c9h_FXQteJo_I5Kt72NEBYXZuwhFg/edit
 +
 
 +
Join the online meeting (VoIP available with this):
  
If the default WebEx link does not work, please try the following: https://www.lotuslive.com/join?schedid=1136358
+
Online Meeting Link:
 +
* https://join.freeconferencecall.com/hl7cgchairs
 +
Online Meeting ID:
 +
* hl7cgchairs
  
NOTE: We sometimes schedule calls at noon US Eastern Time to work on project specific items. These special calls will also be listed in the Conference Call page as well.
+
Dial into the conference:
 +
Dial-in Number:  (563) 999-1048 - United States
 +
 
 +
Access Code201608
 +
 
 +
International Dial-in Numbers:  https://www.freeconferencecall.com/wall/hl7cgchairs/#international
  
 
===Current Conference Call Agendas and Minutes===
 
===Current Conference Call Agendas and Minutes===
Conference call agendas and minutes leading up to the next HL7 Work Group Meeting are kept on this page: [[CG_WG_Call_Notes_leading_to_2012_January_WGM|Conference Calls]].
+
Conference call agendas and minutes leading up to the next HL7 Work Group Meeting
 +
 
 +
May 2018 HL7 Working Group Meeting
 +
May 12, 2018 to May 18, 2018 - Maritim Hotel Köln, Cologne, Germany
 +
 +
[http://wiki.hl7.org/index.php?title=CG_WG_Call_Notes_leading_to_2018_May_WGM CG_WG_Call_Notes_leading_to_2018_May_WGM].
  
 
===Conference Call Archive===
 
===Conference Call Archive===
 
Conference call minutes are partitioned into separate pages chronologically by work group meeting.
 
Conference call minutes are partitioned into separate pages chronologically by work group meeting.
 +
http://wiki.hl7.org/index.php?title=CG_WG_Call_Notes_leading_to_2018_May_WGM
 +
*[[CG WG Call Notes leading to 2018 September WGM|2018 September]] - Baltimore, MD
 +
*[[CG WG Call Notes leading to 2018 May WGM|2018 May]] - Cologne, Germany
 +
*[[CG WG Call Notes leading to 2018 January WGM|2018 January]] - New Orleans, LA
 +
*[[CG WG Call Notes leading to 2017 September WGM|2017 September]] - San Diego, CA
 +
*[[CG WG Call Notes leading to 2017 May WGM|2017 May]] - Madrid, Spain
 +
*[[CG WG Call Notes leading to 2017 January WGM|2017 January]] - San Antonio, TX
 +
*[[CG WG Call Notes leading to 2016 September WGM|2016 September]] - Balitmore, MD
 +
*[[CG WG Call Notes leading to 2016 May WGM|2016 May]] - Montreal, Canada
 +
*[[CG WG Call Notes leading to 2016 January WGM|2016 January]] - Orlando, FL
 +
*[[CG WG Call Notes leading to 2015 September WGM|2015 September]] - Atlanta, GA
 +
*[[CG WG Call Notes leading to 2015 May WGM|2015 May]] - Paris, France
 +
*[[CG WG Call Notes leading to 2015 January WGM|2015 Jan]] - San Antonio, TX
 +
*[[CG WG Call Notes leading to 2014 September WGM|2014 Sep]] - Chicago, MI
 +
*[[CG WG Call Notes leading to 2014 May WGM|2014 May]] - Phoenix, AZ
 +
*[[CG WG Call Notes leading to 2014 January WGM|2014 January]] - San Antonio, TX
 +
*[[CG WG Call Notes leading to 2013 September WGM|2013 September]] - Cambridge, MA
 +
*[[CG WG Call Notes leading to 2013 May WGM|2013 May]] - Atlanta, GA
 +
*[[CG WG Call Notes leading to 2012 September WGM|2012 September]] - Baltimore, MD
 +
*[[CG WG Call Notes leading to 2012 May WGM|2012 May]] - Vancouver, BC
 
*[[CG WG Call Notes leading to 2012 January WGM|2012 January]] - San Antonio, TX
 
*[[CG WG Call Notes leading to 2012 January WGM|2012 January]] - San Antonio, TX
 
*[[CG WG Call Notes leading to 2011 September WGM|2011 September ]] - San Diego, CA
 
*[[CG WG Call Notes leading to 2011 September WGM|2011 September ]] - San Diego, CA
Line 49: Line 95:
 
*[[CG WG Call Notes leading to 2011 January WGM sydney|2011 January]] - Sydney, Australia
 
*[[CG WG Call Notes leading to 2011 January WGM sydney|2011 January]] - Sydney, Australia
 
*[[CG WG Call Notes leading to 2010 October WGM|2010 October]] - Cambridge, MA
 
*[[CG WG Call Notes leading to 2010 October WGM|2010 October]] - Cambridge, MA
*2010 May - Rio de Janeiro, Brazil
+
:Older conference call minutes have been uploaded to the clinical genomic document repository on the main HL7 site.
*2010 January - Phoenix, AZ
 
*2009 September - Atlanta, GA
 
*2009 May - Kyoto, Japan
 
*2009 January - Lake Buena Vista, FL
 
*2008 September - Vancouver, B.C., Canada
 
*2008 May - Phoenix, Arizona
 
*2008 January - San Antonio, TX
 
*2007 September - Atlanta, GA
 
*2007 May
 
*2007 January
 
*2006 September
 
*2006 May
 
*2006 January
 
  
== CG Projects ==
+
==Active CG Projects ==
===[[Family History - Pedigree]]===
+
All active projects can be viewed here:
*[[Family Health History Overview]]
 
  
===[[Models - Domain Information and Domain Analysis]]===
+
https://www.hl7.org/Special/committees/clingenomics/projects.cfm
This effort is still ongoing, currently focused on the Domain Analysis Model for Clinical Genomics.
 
This effort is still ongoing, currently focused on the Domain Analysis Model for Clinical Genomics.
 
  
===[[GTR - CDA Implementation Guide for Genetic Testing Report]]===
+
[[CG Project Archive]]
[[The GTR home page]]
 
  
===[[Genotype Topic]]===
+
== Current Clinical Genomic Standards ==
This approved DSTU spec has been deprecated and several portions of it are under normative ballot as CMETs (e.g., Genetic Variations CMET).
+
All active CG standards and products are here:
  
===[[Genetic Variation]]===
+
https://www.hl7.org/Special/committees/clingenomics/products.cfm
This CMET standard (component model that can be used in other models) has passed normative ballot by the numbers but is still under ballot reconciliation.
 
  
===[[Gene Expression]]===
+
[[CG Standards Archive]]
This CMET stanadard is under development and will most likely be balloted in 2012.
 
  
===[[Clinical Sequencing]]===
+
==Group Roadmap==
 +
[[CG Roadmap]]
  
 
==Working Group Meetings==
 
==Working Group Meetings==
===[[CG Working Group Meeting Agendas]]===
+
[[CG Working Group Meeting Agendas]]
===[[CG Working Group Meeting Minutes]]===
+
 
 +
[[CG Working Group Meeting Minutes]]
  
 
==Sub-Teams==
 
==Sub-Teams==
  
* [[CG Vocabulary]]
+
* FHIR
* [[Canonical Pedigree Project]]
+
https://docs.google.com/document/d/1FGCQRtxJKyHhnC1uB_t4sJZ9yXbLMGOqPXHPr5tSLLQ/edit#heading=h.zfi9l8jfe4la
 
+
* Modeling
==Domains==
+
https://docs.google.com/document/d/18sVxZdAeA98ok5hdGwmmVxVinTq_vAT9B-Z8GIAyRiM/edit
===Clinical Genomics===
 
====Clinical Genomics Facilitators====
 
Modeling:
 
Amnon Shabo
 
shabo@il.ibm.com
 
IBM Research Lab in Haifa
 
 
 
Publishing:
 
Grant Wood
 
Grant.Wood@imail.org
 
Intermountain Healthcare
 
 
 
Vocabulary:
 
Joyce Hernandez
 
joyce_hernandez@merck.com
 
 
 
====Standards====
 
'''''HL7 CGPED, R1-'''''
 
:HL7 Version 3 Pedigree Topic - Family History
 
:Last Ballot: Normative Ballot 1 - May, 2007
 
 
 
'''''HL7 CG_GV, R1'''''
 
:HL7 Version 3 Standard: Genetic Variation, Release 1
 
:Last Ballot: Normative Ballot 2 - January 2009
 
 
 
'''''HL7 IG CG_GENO, R1'''''
 
:HL7 Version 3 Genotype, Release 1
 
:Last Ballot: DSTU Ballot 1 - January 2009
 
 
 
'''''HL7 IG LOINCGENVA, R1'''''
 
:HL7 Version 2 Implementation Guide: Clinical Genomics; Fully LOINC-Qualified Genetic Variation Model, Release 1 (US Realm)
 
 
 
==Reference Links==
 
'''BRIDG''' file release site
 
http://gforge.nci.nih.gov/frs/?group_id=342
 
  
'''BRIDG''' Project site
+
[[CG Subteam Archive]]
http://gforge.nci.nih.gov/projects/bridg-model/
 
  
 +
==Archived Work==
 +
[[CG Other Archived Work]]
  
 
[[Category:Work_Group]]
 
[[Category:Work_Group]]
 
[[Category:Structure_and_Semantic_Design_Steering_Division]]
 
[[Category:Structure_and_Semantic_Design_Steering_Division]]

Latest revision as of 14:02, 4 June 2018

Main Page | Clinical Genomics (CG)

This page is for the Clinical Genomics Work Group

Mission and Charter

Mission

This group supports the HL7 mission to create and promote its standards by enabling the communication between interested parties of the clinical and personalized genomic data. The focus of clinical genomics work is the personalization (differences in individual's genome) of the genomic data and the linking to relevant clinical information.

This Work Group will facilitate the development of common standards for clinical research information management across a variety of organizations -- including national and international government agencies and regulatory bodies, private research efforts, and sponsored research -- and thus the availability of safe and effective therapies by improving the processes and efficiencies associated with regulated clinical research.

Charter

Work Products and Contributions to HL7 Processes

The Work Group will collect, review, develop and document clinical genomics use cases in order to determine what data needs to be exchanged. The WG will review existing genomics standards formats such as BSML (Bioinformatics Sequence Markup Language), MAGE-ML (Microarray and Gene Expression Markup Language), LSID (Life Science Identifier) and other. This group will recommend enhancements to and/or extensions of HL7's normative standards for exchange of information about clinical genomic orders and observations.

In addition, Clinical Genomics will seek to assure that related or supportive standards produced by other HL7 groups are robust enough to accommodate their use in both research and clinical care use. The group will also monitor information interchange standards developed outside HL7, and attempt harmonization of information content and representation of such standards with the HL7 content and representation.

Formal Relationships with Other HL7 Groups

This Work Group will coordinate with a large number of other Work Groups in order to accomplish its mission. Strongest relationships will be with:

  • Orders and Observation
  • Anatomic Pathology
  • Image Integration
  • Clinical Statement
  • Clinical Decision Support
  • Patient Care
  • Electronic Health Records
  • Modeling and Methodology
  • Structured Documents

Formal Relationships with Groups Outside of HL7

Decision Making

See Work Group Decision Making Document:

http://www.hl7.org/Special/Committees/decisionmaking.cfm

Date of Last Revision: Final March 2, 2009

Conference Calls, Agendas and Minutes

WGM Agenda and Minutes

http://wiki.hl7.org/index.php?title=CG_Working_Group_Meeting_Minutes

Web and Teleconference(default)

The weekly calls are on on Tuesday's at 11 US Eastern Time.

Minutes: https://docs.google.com/document/d/12-uBrMmav71a3_c9h_FXQteJo_I5Kt72NEBYXZuwhFg/edit

Join the online meeting (VoIP available with this):

Online Meeting Link:

Online Meeting ID:

  • hl7cgchairs

Dial into the conference: Dial-in Number: (563) 999-1048 - United States

Access Code: 201608

International Dial-in Numbers: https://www.freeconferencecall.com/wall/hl7cgchairs/#international

Current Conference Call Agendas and Minutes

Conference call agendas and minutes leading up to the next HL7 Work Group Meeting

May 2018 HL7 Working Group Meeting May 12, 2018 to May 18, 2018 - Maritim Hotel Köln, Cologne, Germany

CG_WG_Call_Notes_leading_to_2018_May_WGM.

Conference Call Archive

Conference call minutes are partitioned into separate pages chronologically by work group meeting. http://wiki.hl7.org/index.php?title=CG_WG_Call_Notes_leading_to_2018_May_WGM

Older conference call minutes have been uploaded to the clinical genomic document repository on the main HL7 site.

Active CG Projects

All active projects can be viewed here:

https://www.hl7.org/Special/committees/clingenomics/projects.cfm

CG Project Archive

Current Clinical Genomic Standards

All active CG standards and products are here:

https://www.hl7.org/Special/committees/clingenomics/products.cfm

CG Standards Archive

Group Roadmap

CG Roadmap

Working Group Meetings

CG Working Group Meeting Agendas

CG Working Group Meeting Minutes

Sub-Teams

  • FHIR

https://docs.google.com/document/d/1FGCQRtxJKyHhnC1uB_t4sJZ9yXbLMGOqPXHPr5tSLLQ/edit#heading=h.zfi9l8jfe4la

  • Modeling

https://docs.google.com/document/d/18sVxZdAeA98ok5hdGwmmVxVinTq_vAT9B-Z8GIAyRiM/edit

CG Subteam Archive

Archived Work

CG Other Archived Work