CG WG Call Notes leading to 2016 September WGM

August 16, 2016 -- Weekly call

Agenda

===Brief reports ===Balitmore Agenda - first draft ====http://wiki.hl7.org/index.php?title=File:HL7_WGM_Sep2016_-_Clinical_Genomics_Agenda_v1.docx ===Docs to be reviewed to prep for Baltimore ====Mission & Charter =====http://www.hl7.org/documentcenter/public/wg/clingenomics/Mission-Charter_ClinicalGenomics_approved%20091714%20final.docx ===Decision Making Process =====http://www.hl7.org/documentcenter/public/wg/clingenomics/HL7_WG_DMP_v3.0_CG_v2_09172014%20final.doc ===SWOT ====http://www.hl7.org/documentcenter/public/wg/clingenomics/CG-SWOT_v2_091714%20final.docx

Attendees

1. Andrea Pitkus - IMO - apitkus@imo-online.com
2. Bob Milius - NMDP - bmilius@nmdp.org
3. Bob Wildin - NHGRI - bob.wildin@nih.gov
4. Brett Johnson - BCH - icanbrj@gmail.com
5. Joel Schneider - NMDP - jschneid@nmdp.org
6. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
7. Joseph Kane - Epic - jkane@epic.com
8. Kevin Power - Cerner - kpower@cerner.com
9. Robert Barkovich- Health Linkages - robert@healthlinkages.com
10. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com
11. Terry McDonnell - Syapse - terrym@syapse.com
12. Tianlong Chen - USTC - wiwjp619@gmail.com
13. Xiao Luo - USTC - l.xander.233@gmail.com
14. Yi Wang - USTC - panzer.wy@gmail.com

Draft Minutes

HL7_CG_20160816.pdf

July 26, 2016 -- Weekly call

Agenda

• Minutes approval
  • July 19 - HL7_CG_20160719.pdf
• Brief reports
• How to sign up to ballot
• Ballot content status
• Other?

Attendees

1. Anwaruddin Mohammad - Oracle - anwaruddin.mohammad@oracle.com
2. Bob Freimuth - Mayo Clinic - freimuth.robert@mayo.edu
3. Bob Milius - NMDP - bmilius@nmdp.org
4. Bowen Gong - HFUT - bowen.g.1993@gmail.com
5. Bret Heale - Intermountain Healthcare - bheale@gmail.com
6. Brett Johnson -BCH - icanbrj@gmail.com
7. David Kreda - HMS - david.kreda@gmail.com
8. Gaston Fiore - BCH - gafiore@alum.mit.edu
9. Gil Alterovitz- Hms/BCH - gilusa@gmail.com
10. JD Nolen - Cerner - johndavid.nolen@cerner.com
11. Joel Schneider - NMDP - jschneid@nmdp.org
12. Jonathan Holt - SeqTechDX - jholt@seqtechdx.com
13. Kevin Power - Cerner - kpower@cerner.com
14. Perry Mar - Partners HealthCare System - pmar@partners.org
15. Rick Maguire - Oracle - rick.maguire@oracle.com
16. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com
17. Siew Lam - Intermountain Healthcare - siew.lam@imail.org
18. Tianlong Chen - USTC- wiwjp619@gmail.com
19. Yi Wang- USTC- panzer.wy@gmail.com

Draft Minutes

HL7_CG_20160726.pdf

July 19, 2016 -- Weekly call

Agenda

• Minutes approval
  • July 12 - HL7_CG_20160712.pdf
• Brief reports
• FHIR Ballot content vote
• Other?

Attendees

1. Alex Marzilli - Cornell - amm533@cornell.edu
2. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com (attending only last 30 minutes)
3. Anwaruddin Mohammad - Oracle - anwaruddin.mohammad@oracle.com
4. Bob Freimuth
5. Bob Milius - NMDP - bmilius@nmdp.org
6. Bret Heale - Intermountain Healthcare - bheale@gmail.com
7. Brett johnson - icanbrj@gmail
8. David Kreda - HMS - david.kreda@gmail.com
9. Gaston Fiore - BCH - gafiore@alum.mit.edu
10. Gil Alterovitz- HMS/BCH- gilusa@gmail.com
11. JD Nolen, Cerner, johndavid.nolen@cerner.com
12. Joel Schneider - NMDP - jschneid@nmdp.org
13. Joey Yang- HFUT - jiaoyun@hfut.edu.cn
14. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
15. Joseph Kane - Epic - jkane@epic.com
16. Kevin Power - Cerner - kpower@cerner.com
17. Perry Mar - Partners HealthCare System - pmar@partners.org
18. Siew Lam - Intermountain Healthcare - siew.lam@imail.org
19. Xiaojia Yu - BCH - xiaojia.yu@yahoo.com

Approved Minutes

HL7_CG_20160719.pdf

July 12, 2016 -- Weekly call

Agenda

• Minutes approval
  • July 5 - HL7_CG_20160705.pdf
  • June 28 - HL7_CG_20160628.pdf
• Brief reports
• FHIR Genomics proposals (see email with Google Poll)
  • Remove Sequence > Profile for Consensus Sequence Blocks
  • Change cardinality of ObservationGenetics.Sequence from 0..1 to 0..*
  • Update Sequence.quality to include specifications from precisionFDA
• Sequence Coordinate System - if we have time
• Other?

Attendees

1. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
2. David Kreda - david.kreda@gmail.com
3. Eric Whitebay
4. Gaston Fiore - BCH - gaston.fiore@gmail.com
5. Gil Alterovitz - HMS/BCH - gilusa@gmail.com
6. JD Nolen - Cerner
7. Jeremy Warner - Vanderbilt
8. Joel Schneider - NMDP - jschneid@nmdp.org
9. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
10. Joseph Kane - Epic - jkane@epic.com
11. Perry Mar - Partners HealthCare System - pmar@partners.org
12. Rick Maguire
13. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com
14. Siew Lam - Intermountain healthcare - siew.lam@imail.org

Approved Minutes

HL7_CG_20160712.pdf

July 5, 2016 -- Weekly call

Agenda

• Brief reports
• V2 Lite - continued discussion
  • see doc sent by Clem
  • http://www.hl7.org/documentcenter/public/wg/clingenomics/2016-06-19%20Outline%20GenomicModel_%20for%20HL7%20V2%20all%20changes%20accepted.docx
  • Resume discussion on page 20
• Other?

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
3. Bob Wildin - NHGRI - bob.wildin@nih.gov
4. Bret Heale
5. Brett Johnson icanbrj@gmail.com
6. David Kreda - david.kreda@gmail.com
7. Eric Whitebay - Epic - ewhiteba@epic.com
8. Gaston Fiore - BCH - gafiore@alum.mit.edu
9. Gil Alterovitz - BCH -
10. Joseph Kane - Epic - jkane@epic.com
11. Joseph Quinn
12. Linda Duffy
13. Mollie Ullman-Cullere - BOC - mollie@betteroutcomes.com
14. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com
15. Siew Lam - Intermountain Healthcare - siew.lam@imail.org
16. Terry McDonnell - Syapse - terrym@syapse.com
17. Tony Farason

Approved Minutes

HL7_CG_20160705.pdf

June 28, 2016 -- Weekly call

Agenda

• Approval of June 21 WG call minutes
  • HL7_CG_20160621.pdf
• Brief reports
• Upcoming Deadlines (not FHIR)
  • 2016-06-29: Call for Co-Chair Nominations Opens – see Co-Chair Election Schedule
  • 2016-07-03: Notification of Intent to Ballot (NIB) Deadline (http://www.hl7.org/permalink/?NIB)
    • V2 Lite
    • V2 Classic
  • 2016-07-10: Final Harmonization proposal submissions due by midnight Eastern time
  • 2016-07-12,13: Harmonization Conference Call (WG participation or notice sent to the listserv indicating that your WG has reviewed and will not participate is a WG Health Metric)
  • 2016-07-24: Reconciliation deadline for ballot; send notice to voters (and submit publication requests when ballots completed )
  • 2016-07-29: WG Co-Chair Nominations close at 5:00 pm ET
  • 2016-08-07: Final Content Deadline
  • 2016-08-12: Co-Chair election statements due to HQ
  • 2016-08-12: Provisional Ballot Opening
  • 2016-08-19: Post your WG agenda link on the WGM Information page (WG Health Metric)
  • 2016-09-05: Deadline to request presentation at the co-chairs dinner/meeting and provide draft presentation
• V2 Lite - continued discussion
• Other?

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Andrea Pitkus- IMO -apitkus@imo-online.com
3. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
4. Clem McDonald - NLM -
5. Eric Whitebay
6. Joel Schneider - NMDP - jschneid@nmdp.org
7. John Moehrke - Moehrke Research- JohnMoehrke@gmail.com
8. Kevin Power - Cerner - kpower@cerner.com
9. Mollie Ullman - BOC - mollie@betteroutcomes.com
10. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com
11. Siew Lam - Intermountain Healthcare - siew.lam@imail.org
12. Terry McDonnell - Syapse - terrym@syapse.com

Approved Minutes

HL7_CG_20160628.pdf

June 21, 2016 -- Weekly call

Agenda

• June 14 WG call minutes
  • HL7_CG_20160614.pdf
• Brief reports
• V2 Lite
• Other?

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Andrea Pitkus - IMO - apitkus@imo-online.com
3. Anwaruddin Mohammad - Oracle - anwaruddin.mohammad@oracle.com
4. Bob Freimuth - Mayo Clinic - freimuth dot robert at mayo dot edu
5. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
6. Bret Heale - Intermountain Healthcare - bheale@gmail.com
7. Brett Johnson icanbrj@gmail.com
8. Clem McDonald - NLM
9. David Kreda - david.kreda@gmail.com
10. Don Rule
11. Eric Whitebay
12. Gaston Fiore - BCH - gaston.fiore@gmail.com
13. Gil Alterovitz - HMS/BCH - gilusa@gmail.co
14. Grant Wood - Intermountain
15. Joel Schneider - NMDP - jschneid@nmdp.org
16. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
17. Joseph Kane - EPIC
18. Kevin Power - Cerner - kpower@cerner.com
19. Mollie Ullman-Cullere - BOC - mollie@betteroutcomes.com
20. Perry Mar - Partners HealthCare System - pmar@partners.org
21. Sandy Jones
22. Shannon
23. Siew lam - Intermountain Healthcare - siew.lam@imail.org
24. Terry McDonnell - Syapse - terrym@syapse.com
25. Usha

Approved Minutes

HL7_CG_20160621.pdf

June 14, 2016 -- Weekly call

Agenda

• June 7 WG call minutes
  • http://wiki.hl7.org/index.php?title=File:HL7_CG_20160607.pdf
• Brief reports
• FHIR current build content vote
• FHIR STU3 deadlines
• Other?

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Andrea Pitkus - IMO - apitkus@imo-online.com
3. Bob Freimuth - Mayo Clinic - freimuth dot robert at mayo dot edu
4. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
5. Bret Heale - Intermountain Healthcare - bheale@gmail.com
6. David Kreda - david.kreda@gmail.com
7. Gaston Fiore - BCH - gaston.fiore@gmail.com
8. JD Nolen - Cerner - johndavid.nolen@cerner.com
9. Jeremy Warner - Vanderbilt - jeremy.warner@vanderbilt.edu
10. Joel Schneider - NMDP - jschneid@nmdp.org
11. Joseph Kane - Epic - jkane@epic.com
12. Kevin Power - Cerner - kpower@cerner.com
13. Mollie Ullman-Cullere BOC mollie@betteroutcomes.com
14. Perry Mar - Partners HealthCare System - pmar@partners.org
15. Siew Lam - Intermountain Healthcare - siew.lam@imail.org

Approved Minutes

HL7_CG_20160614.pdf

June 7, 2016 -- Weekly call

Agenda

• May 24 call minutes approval
  • http://wiki.hl7.org/index.php?title=File:HL7_CG_20160524.pdf
• May 31 call minutes approval
  • http://wiki.hl7.org/index.php?title=File:HL7_CG_20160531.pdf
• Brief reports
• FHIR Deadlines
• Phasing discussion continued
• Other?

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Andrea Pitkus - IMO - apitkus@imo-online.com
3. Bob Freimuth - Mayo Clinic
4. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
5. Brett Johnson - icanbrj@gmail.com
6. Brett Johnson - icanbrj@gmail.com
7. Clem McDonald - NLM
8. David Kreda - david.kreda@gmail.com
9. Eric Whitebay
10. Gaston Fiore - BCH - gaston.fiore@gmail.com
11. George Carlisle - george.carlisle@gmail.com
12. Gil Alterovitz
13. Grant Wood - Intermountain Healthcare
14. JD Nolen - Cerner - johndavid.nolen@cerner.com
15. Joel Schneider - NMDP - jschneid@nmdp.org (until :30)
16. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
17. Joseph Kane - Epic - jkane@epic.com
18. Mollie Ullman-Cullere - mollie@betteroutcomes.com
19. Perry Mar - Partners HealthCare System - pmar@partners.org
20. RB (listed on webex participant list)
21. Scott Bolte - Scott.Bolte@gmail.com
22. Siew Lam - Intermountain Healthcare - siew.lam@imail.org
23. Terry McDonnell - Syapse - terrym@syapse.com

Approved Minutes

HL7_CG_20160607.pdf

May 31, 2016 -- Weekly call

Agenda

• Minutes approval
• WGM Montreal - Minutes approval
  • http://wiki.hl7.org/index.php?title=File:HL7CG_WGM_May2016_Montreal_Minutes.pdf
• Brief reports
• FHIR Deadlines
• Other?

Attendees

1. Andrea Pitkus, IMO, apitkus@imo-online.com
2. Bob Freimuth - Mayo Clinic - freimuth dot robert at mayo dot edu
3. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
4. Bret Heale - Intermountain Healthcare - bheale@gmail.com
5. Brett Johnson - icanbrj@gmail.com
6. David Kreda - david.kreda@gmail.com (joining late!)
7. Gaston Fiore - BCH - gaston.fiore@gmail.com
8. Grant Wood - Intermountain
9. JD Nolen - Cerner - johndavid.nolen@cerner.com
10. Joel Schneider - NMDP - jschneid@nmdp.org
11. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
12. Joseph Kane - Epic - jkane@epic.com
13. Kevin Power - Cerner - kpower@cerner.com
14. Perry Mar - Partners HealthCare System - pmar@partners.org
15. Scott Bolte - Scott.Bolte@gmail.com

Approved Minutes

HL7_CG_20160531.pdf

May 24, 2016 -- Weekly call

Agenda

• Minutes approval
  • May 3 Conference Call Minutes Approval
    • http://wiki.hl7.org/index.php?title=File:HL7_CG_20160503.pdf
  • WGM Montreal - Minutes approval
    • http://wiki.hl7.org/index.php?title=File:HL7CG_WGM_May2016_Montreal_Minutes.pdf
• Brief reports
• FHIR Motion:

On May 19, 2016, the FHIR Subgroup discussed transitioning work from its staging site solution to the standard HL7 solution and voted in favor of such. This is set out below.

HL7 Working Procedure Background

The HL7 GForge tool/website is used by other HL7 Work Groups to support the development and publication of HL7 Standards We are strongly encouraged to use it by the FHIR Management Group. Using it, CGWG members will be able to go to the webpage of a FHIR resource or profile and use the “Propose a change” feature to enter feedback in an itemized manner in the GForge tracker. Feedback on that site can be discussed by the CGWG and FHIR Subgroup. Proposed changes, once approved by a CGWG vote, can then be committed to the FHIR Current Build specification, with a full audit trail of such activities and comments.

To move to this tool, the FHIR Subgroup proposes committing to the FHIR Current Build all changes made on the FHIR Genomics staging site (fhirgenomics.org) since March 27, the date of the commit made for Connectathon 12. After the new commit, CGWG members will use the GForge site to comment and report all new issues using the GForge solution and all future updates to the Current Build will be conducted based upon votes taken against the record in that tool.

Proposed Motion

The CGWG approves: (a) committing the FHIR genomics specifications [1], including all updates to the March 27, 2016 Connectathon 12 snapshot [described here: http://hl7.org/fhir/2016May/index.html] to the HL7 FHIR Current Build; and (b) using the HL7 GForge site henceforth to (i) collect and track CGWG participant feedback regarding changes to genomics resource and profiles; (ii) support developers in implementing the FHIR genomics specification; and

(iii) maintain FHIR genomics specification version control.

Attendees

1. Amnon Shabo (Shvo) - Philips - amnon.shvo@gmail.com
2. Bob Freimuth - Mayo
3. Bob Milius - NMDP - bmilius@nmdp.org (presiding co-chair)
4. Bret Heale - Intermountain Healthcare - bheale@gmail.comB
5. Brett Johnson - icanbrj@gmail.com
6. David Kreda - david.kreda@gmail.com
7. Gaston Fiore - BCH - gaston.fiore@gmail.com
8. Gil Alterovitz- gilusa@gmail.com
9. Joel Schneider - NMDP - jschneid@nmdp.org
10. Jonathan Holt - SeqTechDx - jholt@seqtechdx.com
11. Larry Babb - Sunquest/Geneinsight - lbabb@geneinsight.com
12. Mollie Ullman-Cullere - Better Outcomes - mollie@betteroutcomes.com
13. Perry Mar - Partners HealthCare System - pmar@partners.org
14. Scott Bolte - Niss Consulting - Scott.Bolte@gmail.com

Approved Minutes

HL7_CG_20160524.pdf