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Difference between revisions of "201901 Clinical Genomics"
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(Created page with "{{subst::Template for FHIR Connectathon Track Proposals}}") |
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[[Category:201901_FHIR_Connectathon_Track_Proposals|Jan2019 Proposals]] | [[Category:201901_FHIR_Connectathon_Track_Proposals|Jan2019 Proposals]] | ||
__NOTOC__ | __NOTOC__ | ||
| − | =Track | + | =Clinical Genomics Track= |
| + | |||
| + | ==Zulip Chat== | ||
| + | |||
| + | The Zulip Chat will be used to coordinate among participants during the connectathon: | ||
| + | |||
| + | [https://chat.fhir.org/#narrow/stream/58-connectathon-mgmt/subject/Clinical.20Genomics.20Track Zulip Chat] | ||
| + | |||
==Submitting WG/Project/Implementer Group== | ==Submitting WG/Project/Implementer Group== | ||
<!-- Who is asking for this track? --> | <!-- Who is asking for this track? --> | ||
| + | *[[CG|Clinical Genomics Work Group]] | ||
==Justification== | ==Justification== | ||
<!--Why is this an important track to include in the connectathon - include implementer need, impact on ballot, FMM readiness of the resources, etc. --> | <!--Why is this an important track to include in the connectathon - include implementer need, impact on ballot, FMM readiness of the resources, etc. --> | ||
| − | + | Genomic data are of increasing importance to clinical care and secondary analysis. After initial Feedback from the first ballot of the Clinical Genomics Implementation Guide, considerable updates have been made, and the recently balloted IG and profiles should be tested in the Connectathon for more feedback and trial use. | |
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==Proposed Track Lead== | ==Proposed Track Lead== | ||
<!-- Name, email and Skype id of individual who will coordinate the track at the connectathon --> | <!-- Name, email and Skype id of individual who will coordinate the track at the connectathon --> | ||
| − | + | [mailto:gilusa@gmail.com Gil Alterovitz] | |
| + | |||
==Expected participants== | ==Expected participants== | ||
<!-- List of the individuals and/or organizations that have indicated a desire to attend the connectathon and implement this track --> | <!-- List of the individuals and/or organizations that have indicated a desire to attend the connectathon and implement this track --> | ||
| + | Gil Alterovitz, James Jones, ... | ||
==Roles== | ==Roles== | ||
| − | |||
<!-- Roles are sets of functionality (generally defined by a Conformance resource) that a single system can take on --> | <!-- Roles are sets of functionality (generally defined by a Conformance resource) that a single system can take on --> | ||
| − | === | + | ===FHIR Client=== |
| + | <!-- Provide a description of the capabilities this role will have within the connectathon --> | ||
| + | Support the sending of the Sequence resource/genetics profiles operations: create, history, read, search and update. | ||
| + | |||
| + | ===FHIR Server=== | ||
<!-- Provide a description of the capabilities this role will have within the connectathon --> | <!-- Provide a description of the capabilities this role will have within the connectathon --> | ||
| + | Support the receiving and processing of the Sequence resource/genetics profiles operations: create, history, read, search and update. | ||
| + | |||
==Scenarios== | ==Scenarios== | ||
<!-- What will be the actions performed by participants? --> | <!-- What will be the actions performed by participants? --> | ||
| − | === | + | ===Register a New Sequence and Observation=== |
| − | + | ===Register a New Genomics Report=== | |
| − | + | ===Scenario 2 Clinical Sequencing - Germline Testing=== | |
| − | + | ===Scenario 3 Family Member History=== | |
| − | + | ===Scenario 4 Clinical and Research Data Warehouses=== | |
| − | + | ===Scenario 5 HLA Typing=== | |
| − | + | ===Scenario 7 Comprehensive Pathology Report=== | |
| + | ===What else?=== | ||
==TestScript(s)== | ==TestScript(s)== | ||
Revision as of 14:23, 29 October 2018
Clinical Genomics Track
Zulip Chat
The Zulip Chat will be used to coordinate among participants during the connectathon:
Submitting WG/Project/Implementer Group
Justification
Genomic data are of increasing importance to clinical care and secondary analysis. After initial Feedback from the first ballot of the Clinical Genomics Implementation Guide, considerable updates have been made, and the recently balloted IG and profiles should be tested in the Connectathon for more feedback and trial use.
Proposed Track Lead
Gil Alterovitz
Expected participants
Gil Alterovitz, James Jones, ...
Roles
FHIR Client
Support the sending of the Sequence resource/genetics profiles operations: create, history, read, search and update.
FHIR Server
Support the receiving and processing of the Sequence resource/genetics profiles operations: create, history, read, search and update.
